Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TVP23AA6NH52 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 AC002347.1-201ENST00000569543 541 ntBASIC14.35□□□□□ -0.11
TVP23AA6NH52 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 AC068137.2-201ENST00000605408 478 ntBASIC14.35□□□□□ -0.11
TVP23AA6NH52 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 AL513190.1-201ENST00000621254 727 ntBASIC14.35□□□□□ -0.11
TVP23AA6NH52 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.35□□□□□ -0.11
TVP23AA6NH52 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TVP23AA6NH52 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
TVP23AA6NH52 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC023824.1-201ENST00000562945 2975 ntBASIC14.34□□□□□ -0.11
TVP23AA6NH52 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC074386.1-202ENST00000463561 864 ntBASIC14.34□□□□□ -0.11
TVP23AA6NH52 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 MIR4321-201ENST00000592276 80 ntBASIC14.34□□□□□ -0.11
TVP23AA6NH52 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.34□□□□□ -0.11
TVP23AA6NH52 AC022532.1-201ENST00000624563 1728 ntBASIC14.34□□□□□ -0.11
TVP23AA6NH52 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TVP23AA6NH52 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms