Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AC084121.4-201ENST00000641598 221 ntBASIC15.02■□□□□ -0
PRAMEF25A6NGN4 AF228730.8-201ENST00000642140 221 ntBASIC15.02■□□□□ -0
PRAMEF25A6NGN4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 MST1L-201ENST00000442552 2185 ntBASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRAMEF25A6NGN4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 TSEN15P1-201ENST00000423257 515 ntBASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 FAM58DP-201ENST00000428076 619 ntBASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 SPTSSB-204ENST00000617024 1292 ntBASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 AC006486.2-201ENST00000624246 2199 ntBASIC15.01□□□□□ -0.01
PRAMEF25A6NGN4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PRAMEF25A6NGN4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms