Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCCD1A6NED2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCCD1A6NED2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCCD1A6NED2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCCD1A6NED2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RCCD1A6NED2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.02■□□□□ 0.31
RCCD1A6NED2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RCCD1A6NED2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 LINC01101-201ENST00000622953 1884 ntBASIC17.01■□□□□ 0.31
RCCD1A6NED2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCCD1A6NED2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.01■□□□□ 0.31
RCCD1A6NED2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
RCCD1A6NED2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RCCD1A6NED2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17■□□□□ 0.31
RCCD1A6NED2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17■□□□□ 0.31
RCCD1A6NED2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17■□□□□ 0.31
RCCD1A6NED2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17■□□□□ 0.31
RCCD1A6NED2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17■□□□□ 0.31
RCCD1A6NED2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 AC073389.1-201ENST00000595595 795 ntBASIC17■□□□□ 0.31
RCCD1A6NED2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RCCD1A6NED2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCCD1A6NED2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17■□□□□ 0.31
RCCD1A6NED2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AL136982.4-201ENST00000437689 1740 ntBASIC16.99■□□□□ 0.31
RCCD1A6NED2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms