Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AL133267.1-201ENST00000398220 340 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 KRT43P-201ENST00000434019 910 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC007274.1-201ENST00000439805 662 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 PRORSD1P-202ENST00000563365 2154 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC120045.2-201ENST00000567334 178 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 MIR5189-201ENST00000577370 114 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 BTNL10-201ENST00000595971 695 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC233724.13-201ENST00000598383 410 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AL512343.1-201ENST00000605837 169 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC020916.1-201ENST00000587762 1774 ntBASIC13.94□□□□□ -0.18
MBD3L3A6NE82 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 C1QBPP1-201ENST00000400117 770 ntBASIC13.93□□□□□ -0.18
MBD3L3A6NE82 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 MIR1909-201ENST00000411312 80 ntBASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC022210.1-201ENST00000449856 793 ntBASIC13.93□□□□□ -0.18
MBD3L3A6NE82 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 VDAC1P7-201ENST00000462417 847 ntBASIC13.93□□□□□ -0.18
MBD3L3A6NE82 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.93□□□□□ -0.18
MBD3L3A6NE82 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MBD3L3A6NE82 AC069224.1-201ENST00000566372 1715 ntBASIC13.93□□□□□ -0.18
MBD3L3A6NE82 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms