Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 AC021087.4-201ENST00000563761 564 ntBASIC13.96□□□□□ -0.17
SHISA3A0PJX4 AC006557.2-201ENST00000592985 1240 ntBASIC13.96□□□□□ -0.17
SHISA3A0PJX4 AC008667.4-201ENST00000607370 168 ntBASIC13.96□□□□□ -0.17
SHISA3A0PJX4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHISA3A0PJX4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHISA3A0PJX4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 NORAD-201ENST00000565493 5339 ntBASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 LINC01230-201ENST00000625222 3017 ntBASIC13.95□□□□□ -0.18
SHISA3A0PJX4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 LAGE3P1-201ENST00000425356 484 ntBASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 FOSL1P1-201ENST00000511041 816 ntBASIC13.95□□□□□ -0.18
SHISA3A0PJX4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 ZBED1P1-201ENST00000502364 1930 ntBASIC13.95□□□□□ -0.18
SHISA3A0PJX4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 AL589702.1-201ENST00000641229 1509 ntBASIC13.95□□□□□ -0.18
SHISA3A0PJX4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHISA3A0PJX4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms