Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AC134407.2-201ENST00000625089 1978 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 RNU1-129P-201ENST00000384064 167 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 ELK2BP-201ENST00000415014 1224 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AP002469.2-201ENST00000531724 424 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 U1.21-201ENST00000580816 167 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 MIR4321-201ENST00000592276 80 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRDV1A0A1B0GX56 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 AL031133.1-201ENST00000406807 723 ntBASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 MTDHP4-201ENST00000600287 670 ntBASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 AC116407.4-201ENST00000623319 1061 ntBASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 MYO15B-237ENST00000642007 4893 ntBASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRDV1A0A1B0GX56 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms