Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 RNU1-129P-201ENST00000384064 167 ntBASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 U1.21-201ENST00000580816 167 ntBASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL031055.1-201ENST00000606362 631 ntBASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF103-CHMP3A0A140T963 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 HMGA1P7-201ENST00000406908 502 ntBASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 AL513480.1-201ENST00000451731 511 ntBASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 AC021097.1-201ENST00000607902 574 ntBASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 SSR4P1-203ENST00000599569 2260 ntBASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RNF103-CHMP3A0A140T963 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF103-CHMP3A0A140T963 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms