Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 TIMM8BP1-201ENST00000452384 211 ntBASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 IGHV3-62-201ENST00000520057 340 ntBASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AC105233.2-201ENST00000523697 349 ntBASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AF228730.5-201ENST00000530288 346 ntBASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 MTDHP5-201ENST00000598980 586 ntBASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 MCCD1P2-201ENST00000423228 335 ntBASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV1A0A0A0MS02 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms