Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 AL592424.1-201ENST00000563624 1536 ntBASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA3PQ9Y6N3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 Z92544.3-201ENST00000624747 417 ntBASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA3PQ9Y6N3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA3PQ9Y6N3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCA3PQ9Y6N3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms