Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 AC091951.1-201ENST00000512854 2465 ntBASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 AC091076.1-201ENST00000610741 619 ntBASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 AP000550.4-202ENST00000639755 178 ntBASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 COL6A4P2-202ENST00000504443 2753 ntBASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.62□□□□□ -0.23
UBQLN2Q9UHD9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 AL356585.2-201ENST00000625078 2396 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 REXO1L8P-201ENST00000604378 1897 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 MBLAC2-202ENST00000514906 1936 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 UPK3BP1-201ENST00000428678 509 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 DGCR9-201ENST00000609630 2415 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 AP003680.1-201ENST00000598970 3660 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 FGD5P1-202ENST00000614866 2498 ntBASIC13.61□□□□□ -0.23
UBQLN2Q9UHD9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 AC148477.4-201ENST00000613430 1793 ntBASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBQLN2Q9UHD9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms