Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSFQ9UBX1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSFQ9UBX1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSFQ9UBX1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.06■□□□□ 0
CTSFQ9UBX1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.06■□□□□ 0
CTSFQ9UBX1 HAUS4P1-201ENST00000406739 1145 ntBASIC15.06■□□□□ 0
CTSFQ9UBX1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 EEF1DP4-201ENST00000446006 880 ntBASIC15.06■□□□□ 0
CTSFQ9UBX1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.06■□□□□ 0
CTSFQ9UBX1 AL589987.1-201ENST00000453380 819 ntBASIC15.06■□□□□ 0
CTSFQ9UBX1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.06■□□□□ 0
CTSFQ9UBX1 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.06■□□□□ 0
CTSFQ9UBX1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CTSFQ9UBX1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.06■□□□□ 0
CTSFQ9UBX1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.06■□□□□ 0
CTSFQ9UBX1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CTSFQ9UBX1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CTSFQ9UBX1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
CTSFQ9UBX1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CTSFQ9UBX1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CTSFQ9UBX1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
CTSFQ9UBX1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CTSFQ9UBX1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CTSFQ9UBX1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CTSFQ9UBX1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CTSFQ9UBX1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
CTSFQ9UBX1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.05■□□□□ 0
CTSFQ9UBX1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CTSFQ9UBX1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTSFQ9UBX1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.05■□□□□ 0
CTSFQ9UBX1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CTSFQ9UBX1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.05■□□□□ -0
CTSFQ9UBX1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.05■□□□□ -0
CTSFQ9UBX1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.05■□□□□ -0
CTSFQ9UBX1 SRD5A3P1-201ENST00000603021 949 ntBASIC15.05■□□□□ -0
CTSFQ9UBX1 AC074044.1-201ENST00000609673 707 ntBASIC15.05■□□□□ -0
CTSFQ9UBX1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.05■□□□□ -0
CTSFQ9UBX1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTSFQ9UBX1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.05■□□□□ -0
CTSFQ9UBX1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.05■□□□□ -0
CTSFQ9UBX1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.05■□□□□ -0
CTSFQ9UBX1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CTSFQ9UBX1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSFQ9UBX1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSFQ9UBX1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CTSFQ9UBX1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CTSFQ9UBX1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSFQ9UBX1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CTSFQ9UBX1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSFQ9UBX1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSFQ9UBX1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSFQ9UBX1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms