Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC119751.2-201ENST00000504529 210 ntBASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SLED1-202ENST00000512051 380 ntBASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AL607033.1-201ENST00000623900 1599 ntBASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 MYCLP2-201ENST00000449268 967 ntBASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
KIAA1549Q9HCM3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 MIR1909-201ENST00000411312 80 ntBASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 AC244107.1-201ENST00000442033 332 ntBASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 AC010319.3-201ENST00000597028 470 ntBASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.12□□□□□ -0.15
KIAA1549Q9HCM3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AL512384.1-201ENST00000406683 331 ntBASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 TTTY23B-201ENST00000442790 549 ntBASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 MIR4313-201ENST00000580760 101 ntBASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms