Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AC092919.2-201ENST00000623631 1645 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 HSPA7-201ENST00000445535 1927 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 AL359881.3-201ENST00000602640 1721 ntBASIC13.05□□□□□ -0.32
NKX6-2Q9C056 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NKX6-2Q9C056 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 STK19B-204ENST00000512515 211 ntBASIC13.04□□□□□ -0.32
NKX6-2Q9C056 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 GCSHP2-201ENST00000560971 527 ntBASIC13.04□□□□□ -0.32
NKX6-2Q9C056 NAPSB-206ENST00000562112 1266 ntBASIC13.04□□□□□ -0.32
NKX6-2Q9C056 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-2Q9C056 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AL731571.1-201ENST00000617058 5428 ntBASIC13.03□□□□□ -0.32
NKX6-2Q9C056 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AC009336.1-201ENST00000608941 1553 ntBASIC13.03□□□□□ -0.32
NKX6-2Q9C056 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms