Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX11Q96FC9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX11Q96FC9 AC105917.1-201ENST00000506637 2539 ntBASIC19.07■□□□□ 0.64
DDX11Q96FC9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX11Q96FC9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 UGT1A2P-201ENST00000454886 866 ntBASIC19.06■□□□□ 0.64
DDX11Q96FC9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 RN7SL204P-201ENST00000582831 262 ntBASIC19.06■□□□□ 0.64
DDX11Q96FC9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 AC073439.1-201ENST00000624121 1774 ntBASIC19.06■□□□□ 0.64
DDX11Q96FC9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX11Q96FC9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX11Q96FC9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 AC112504.1-201ENST00000623415 1841 ntBASIC19.05■□□□□ 0.64
DDX11Q96FC9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.05■□□□□ 0.64
DDX11Q96FC9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX11Q96FC9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 AC105233.2-201ENST00000523697 349 ntBASIC19.04■□□□□ 0.64
DDX11Q96FC9 AF228730.5-201ENST00000530288 346 ntBASIC19.04■□□□□ 0.64
DDX11Q96FC9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX11Q96FC9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX11Q96FC9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms