Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 AC136621.1-201ENST00000624017 2304 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 AL590627.1-203ENST00000421194 1026 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 HNRNPDP1-201ENST00000439535 754 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 FAM185BP-201ENST00000443595 716 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 RNA5SP419-201ENST00000515908 135 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 AL356488.2-201ENST00000602755 427 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 BX640515.1-201ENST00000617215 977 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 HADH-212ENST00000638621 741 ntTSL 5 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 AL109954.1-202ENST00000564051 2148 ntBASIC14□□□□□ -0.17
FOXRED1Q96CU9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
FOXRED1Q96CU9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXRED1Q96CU9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC093724.1-201ENST00000448659 1027 ntBASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AL031432.2-201ENST00000566714 459 ntBASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AL928711.1-201ENST00000570165 459 ntBASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC120114.3-201ENST00000611923 658 ntBASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXRED1Q96CU9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms