Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC051619.7-201ENST00000568314 623 ntBASIC17.02■□□□□ 0.32
DDX1Q92499 LINC02560-201ENST00000596379 459 ntBASIC17.02■□□□□ 0.32
DDX1Q92499 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.02■□□□□ 0.32
DDX1Q92499 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DDX1Q92499 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX1Q92499 AC013268.4-201ENST00000637413 2228 ntBASIC17.02■□□□□ 0.32
DDX1Q92499 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX1Q92499 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.02■□□□□ 0.31
DDX1Q92499 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX1Q92499 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DDX1Q92499 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.02■□□□□ 0.31
DDX1Q92499 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.31
DDX1Q92499 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX1Q92499 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.02■□□□□ 0.31
DDX1Q92499 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX1Q92499 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.02■□□□□ 0.31
DDX1Q92499 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.02■□□□□ 0.31
DDX1Q92499 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
DDX1Q92499 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DDX1Q92499 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 AC022532.1-201ENST00000624563 1728 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DDX1Q92499 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
DDX1Q92499 PPT1-215ENST00000641471 2368 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 MIR943-201ENST00000401286 94 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.01■□□□□ 0.31
DDX1Q92499 AL512356.2-201ENST00000546955 174 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.01■□□□□ 0.31
DDX1Q92499 AC105021.1-202ENST00000570572 669 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.01■□□□□ 0.31
DDX1Q92499 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.01■□□□□ 0.31
DDX1Q92499 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.01■□□□□ 0.31
DDX1Q92499 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 SSR4P1-203ENST00000599569 2260 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 AC105250.1-201ENST00000509378 2057 ntBASIC17.01■□□□□ 0.31
DDX1Q92499 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.01■□□□□ 0.31
DDX1Q92499 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DDX1Q92499 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX1Q92499 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DDX1Q92499 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17■□□□□ 0.31
DDX1Q92499 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
DDX1Q92499 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
DDX1Q92499 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17■□□□□ 0.31
DDX1Q92499 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
DDX1Q92499 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17■□□□□ 0.31
DDX1Q92499 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17■□□□□ 0.31
DDX1Q92499 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17■□□□□ 0.31
DDX1Q92499 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 AC026979.3-201ENST00000607315 403 ntBASIC17■□□□□ 0.31
DDX1Q92499 AL133215.2-201ENST00000609242 977 ntBASIC17■□□□□ 0.31
DDX1Q92499 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17■□□□□ 0.31
DDX1Q92499 AC136621.1-201ENST00000624017 2304 ntBASIC17■□□□□ 0.31
DDX1Q92499 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17■□□□□ 0.31
DDX1Q92499 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17■□□□□ 0.31
DDX1Q92499 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17■□□□□ 0.31
DDX1Q92499 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17■□□□□ 0.31
DDX1Q92499 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
DDX1Q92499 AC073347.1-201ENST00000421633 2643 ntBASIC17■□□□□ 0.31
DDX1Q92499 AC092127.1-201ENST00000567093 3455 ntBASIC17■□□□□ 0.31
DDX1Q92499 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.99■□□□□ 0.31
DDX1Q92499 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DDX1Q92499 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.99■□□□□ 0.31
DDX1Q92499 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms