Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 AL118508.1-201ENST00000613502 2345 ntBASIC17.25■□□□□ 0.35
HERC6Q8IVU3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 SOCS2P1-201ENST00000417727 557 ntBASIC17.25■□□□□ 0.35
HERC6Q8IVU3 AC134915.1-201ENST00000426461 574 ntBASIC17.25■□□□□ 0.35
HERC6Q8IVU3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 AC124283.3-201ENST00000570869 594 ntBASIC17.25■□□□□ 0.35
HERC6Q8IVU3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HERC6Q8IVU3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 PCGF3-213ENST00000620529 1899 ntBASIC17.24■□□□□ 0.35
HERC6Q8IVU3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.24■□□□□ 0.35
HERC6Q8IVU3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AZGP1P1-201ENST00000411909 902 ntBASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 FTH1P14-201ENST00000482930 551 ntBASIC17.24■□□□□ 0.35
HERC6Q8IVU3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC079316.1-201ENST00000548397 411 ntBASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 INTS4P2-202ENST00000614726 2019 ntBASIC17.24■□□□□ 0.35
HERC6Q8IVU3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
HERC6Q8IVU3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 RPL13AP20-201ENST00000459725 609 ntBASIC17.23■□□□□ 0.35
HERC6Q8IVU3 ZNF767P-206ENST00000513792 565 ntBASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 AC009542.2-202ENST00000619004 1067 ntBASIC17.23■□□□□ 0.35
HERC6Q8IVU3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC6Q8IVU3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms