Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 BCAR1-209ENST00000546196 1340 ntBASIC17■□□□□ 0.31
CCDC50Q8IVM0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 PENK-208ENST00000523051 772 ntTSL 5 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 AC018845.2-201ENST00000568326 409 ntBASIC17■□□□□ 0.31
CCDC50Q8IVM0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC50Q8IVM0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17■□□□□ 0.31
CCDC50Q8IVM0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 AC009078.2-202ENST00000463353 338 ntBASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 AC079776.4-201ENST00000511039 504 ntBASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC50Q8IVM0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 HLA-A-201ENST00000376802 1334 ntBASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AC104109.2-201ENST00000602919 1418 ntBASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AC025580.3-201ENST00000617932 1424 ntBASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 AC064836.3-201ENST00000607928 673 ntBASIC16.98■□□□□ 0.31
CCDC50Q8IVM0 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms