Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.01■□□□□ 0.15
LDB1Q86U70 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
LDB1Q86U70 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB1Q86U70 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB1Q86U70 AP001282.1-201ENST00000531301 1499 ntBASIC16.01■□□□□ 0.15
LDB1Q86U70 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB1Q86U70 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LDB1Q86U70 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.01■□□□□ 0.15
LDB1Q86U70 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.01■□□□□ 0.15
LDB1Q86U70 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 DBET-201ENST00000630918 3363 ntBASIC16.01■□□□□ 0.15
LDB1Q86U70 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LDB1Q86U70 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
LDB1Q86U70 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LDB1Q86U70 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LDB1Q86U70 AC011477.6-201ENST00000604980 1927 ntBASIC16■□□□□ 0.15
LDB1Q86U70 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LDB1Q86U70 GPS2P2-201ENST00000430745 888 ntBASIC16■□□□□ 0.15
LDB1Q86U70 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16■□□□□ 0.15
LDB1Q86U70 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16■□□□□ 0.15
LDB1Q86U70 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16■□□□□ 0.15
LDB1Q86U70 ALG1L8P-201ENST00000533887 760 ntBASIC16■□□□□ 0.15
LDB1Q86U70 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LDB1Q86U70 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16■□□□□ 0.15
LDB1Q86U70 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16■□□□□ 0.15
LDB1Q86U70 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
LDB1Q86U70 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LDB1Q86U70 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16■□□□□ 0.15
LDB1Q86U70 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LDB1Q86U70 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 AC092127.1-201ENST00000567093 3455 ntBASIC15.99■□□□□ 0.15
LDB1Q86U70 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LDB1Q86U70 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LDB1Q86U70 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.99■□□□□ 0.15
LDB1Q86U70 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LDB1Q86U70 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB1Q86U70 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB1Q86U70 RBPMS2P1-201ENST00000437762 623 ntBASIC15.99■□□□□ 0.15
LDB1Q86U70 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB1Q86U70 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.99■□□□□ 0.15
LDB1Q86U70 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.99■□□□□ 0.15
LDB1Q86U70 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.99■□□□□ 0.15
LDB1Q86U70 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.99■□□□□ 0.15
LDB1Q86U70 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.99■□□□□ 0.15
LDB1Q86U70 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.99■□□□□ 0.15
LDB1Q86U70 AC134684.3-201ENST00000641758 218 ntBASIC15.99■□□□□ 0.15
LDB1Q86U70 AC073347.1-201ENST00000421633 2643 ntBASIC15.99■□□□□ 0.15
LDB1Q86U70 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
LDB1Q86U70 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.99■□□□□ 0.15
LDB1Q86U70 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.99■□□□□ 0.15
LDB1Q86U70 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LDB1Q86U70 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms