Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 RPSAP43-201ENST00000402237 625 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 UPF3AP3-201ENST00000420996 769 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 TIMM8BP1-201ENST00000452384 211 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AC112482.1-201ENST00000492080 688 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 MIR4469-201ENST00000583919 79 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AC026120.1-201ENST00000611536 926 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AC020658.6-201ENST00000623564 1870 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AC023157.3-201ENST00000619086 2088 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AP003680.1-201ENST00000598970 3660 ntBASIC14.62□□□□□ -0.07
NIPAL3Q6P499 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NIPAL3Q6P499 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 KRT18P13-201ENST00000400056 1290 ntBASIC14.61□□□□□ -0.07
NIPAL3Q6P499 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 RN7SL589P-201ENST00000481268 310 ntBASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 AC136621.1-201ENST00000624017 2304 ntBASIC14.61□□□□□ -0.07
NIPAL3Q6P499 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 TNRC18P2-201ENST00000417666 2714 ntBASIC14.61□□□□□ -0.07
NIPAL3Q6P499 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.61□□□□□ -0.07
NIPAL3Q6P499 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms