Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC104794.3-201ENST00000566840 1248 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TP53TG3HP-202ENST00000569755 579 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC025048.3-201ENST00000590609 569 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AL132655.2-201ENST00000596276 594 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC239800.4-201ENST00000603712 296 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC012645.4-201ENST00000610691 1061 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 AC005702.4-201ENST00000618393 416 ntBASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H3F3CQ6NXT2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 GNAQP1-201ENST00000444815 1067 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 GAPDHP21-201ENST00000450301 1010 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AC093004.1-201ENST00000508850 424 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AL596325.1-201ENST00000563991 1082 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AC092337.1-201ENST00000568699 1129 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AC004790.1-201ENST00000612686 536 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AL109936.8-201ENST00000641772 604 ntBASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3CQ6NXT2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 ALOX12P2-203ENST00000570921 1945 ntBASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 SPDYE19P-201ENST00000338590 713 ntBASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 AC087499.6-201ENST00000411576 835 ntBASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 SPDYE18-201ENST00000510091 1050 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms