Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 AL589702.1-201ENST00000641229 1509 ntBASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 AL512356.2-201ENST00000546955 174 ntBASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 AL138918.1-201ENST00000568306 659 ntBASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL1Q6NVV3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 AL592424.1-201ENST00000563624 1536 ntBASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 AC025678.2-201ENST00000562061 970 ntBASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 AP001059.3-201ENST00000619053 235 ntBASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL1Q6NVV3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL1Q6NVV3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms