Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 AL513210.1-201ENST00000629608 234 ntBASIC16.6■□□□□ 0.25
LRRC38Q5VT99 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC38Q5VT99 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC127383.1-201ENST00000444697 1800 ntBASIC16.59■□□□□ 0.25
LRRC38Q5VT99 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 DNAJB3-201ENST00000446806 729 ntBASIC16.59■□□□□ 0.25
LRRC38Q5VT99 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC097359.3-201ENST00000603982 1210 ntBASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC38Q5VT99 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC38Q5VT99 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRC38Q5VT99 AC136604.1-201ENST00000418535 575 ntBASIC16.58■□□□□ 0.24
LRRC38Q5VT99 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms