Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RBM48Q5RL73 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RBM48Q5RL73 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 ZBED1P1-201ENST00000502364 1930 ntBASIC14.66□□□□□ -0.06
RBM48Q5RL73 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 PRYP5-201ENST00000451909 266 ntBASIC14.66□□□□□ -0.06
RBM48Q5RL73 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.66□□□□□ -0.06
RBM48Q5RL73 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 WASH6P-202ENST00000359512 1437 ntBASIC14.66□□□□□ -0.06
RBM48Q5RL73 AC009090.5-201ENST00000624886 2285 ntBASIC14.66□□□□□ -0.06
RBM48Q5RL73 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RBM48Q5RL73 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 AP005901.3-202ENST00000581653 237 ntBASIC14.65□□□□□ -0.06
RBM48Q5RL73 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 AC133561.5-201ENST00000635547 218 ntBASIC14.65□□□□□ -0.06
RBM48Q5RL73 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RBM48Q5RL73 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RBM48Q5RL73 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms