Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC4Q5GLZ8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HERC4Q5GLZ8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 AC132872.4-202ENST00000622924 2756 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 AC125807.1-201ENST00000483097 614 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 RARRES2P9-201ENST00000565168 469 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 AC140878.1-201ENST00000565277 250 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 AC025048.6-201ENST00000634326 1161 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 PRAL-201ENST00000624952 3286 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 FO538757.1-201ENST00000623083 1397 ntBASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.91■□□□□ 0.46
HERC4Q5GLZ8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HERC4Q5GLZ8 ALG1L8P-201ENST00000533887 760 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms