Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.05□□□□□ -0.16
TFF3Q07654 BNIP3P42-201ENST00000454982 569 ntBASIC14.05□□□□□ -0.16
TFF3Q07654 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 AC104596.2-201ENST00000512793 793 ntBASIC14.05□□□□□ -0.16
TFF3Q07654 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.05□□□□□ -0.16
TFF3Q07654 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TFF3Q07654 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.05□□□□□ -0.16
TFF3Q07654 MIR4525-201ENST00000580000 75 ntBASIC14.05□□□□□ -0.16
TFF3Q07654 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 BNIP3P29-201ENST00000598302 571 ntBASIC14.05□□□□□ -0.16
TFF3Q07654 AL365330.1-201ENST00000607459 531 ntBASIC14.05□□□□□ -0.16
TFF3Q07654 AC011447.5-201ENST00000616168 564 ntBASIC14.05□□□□□ -0.16
TFF3Q07654 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TFF3Q07654 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.05□□□□□ -0.16
TFF3Q07654 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TFF3Q07654 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
TFF3Q07654 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TFF3Q07654 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TFF3Q07654 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TFF3Q07654 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 PCGF3-213ENST00000620529 1899 ntBASIC14.04□□□□□ -0.16
TFF3Q07654 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 RN7SL399P-201ENST00000471648 279 ntBASIC14.04□□□□□ -0.16
TFF3Q07654 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC104989.1-201ENST00000519711 778 ntBASIC14.04□□□□□ -0.16
TFF3Q07654 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
TFF3Q07654 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TFF3Q07654 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
TFF3Q07654 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.04□□□□□ -0.16
TFF3Q07654 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TFF3Q07654 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TFF3Q07654 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TFF3Q07654 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TFF3Q07654 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
TFF3Q07654 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms