Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.15■□□□□ 0.5
HTRA3P83110 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
HTRA3P83110 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HTRA3P83110 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HTRA3P83110 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.15■□□□□ 0.5
HTRA3P83110 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 CHMP1AP1-201ENST00000445563 662 ntBASIC18.15■□□□□ 0.5
HTRA3P83110 AC024293.1-201ENST00000467930 498 ntBASIC18.15■□□□□ 0.5
HTRA3P83110 AL391280.1-201ENST00000506969 1062 ntBASIC18.15■□□□□ 0.5
HTRA3P83110 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC18.15■□□□□ 0.5
HTRA3P83110 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.15■□□□□ 0.5
HTRA3P83110 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.15■□□□□ 0.5
HTRA3P83110 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.15■□□□□ 0.5
HTRA3P83110 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
HTRA3P83110 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
HTRA3P83110 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.15■□□□□ 0.5
HTRA3P83110 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.15■□□□□ 0.5
HTRA3P83110 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 RNF165-205ENST00000588679 2904 ntBASIC18.15■□□□□ 0.5
HTRA3P83110 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HTRA3P83110 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.14■□□□□ 0.5
HTRA3P83110 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HTRA3P83110 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.14■□□□□ 0.5
HTRA3P83110 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HTRA3P83110 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 LETM1P2-201ENST00000597330 2178 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.14■□□□□ 0.49
HTRA3P83110 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.14■□□□□ 0.49
HTRA3P83110 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 RN7SKP214-201ENST00000364208 315 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 Z69890.1-201ENST00000382990 339 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.14■□□□□ 0.49
HTRA3P83110 RN7SL396P-201ENST00000471086 295 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 GAPDHP40-201ENST00000505218 1006 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HTRA3P83110 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.14■□□□□ 0.49
HTRA3P83110 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.14■□□□□ 0.49
HTRA3P83110 ZACNP1-201ENST00000612259 710 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 AC073911.3-201ENST00000624401 631 ntBASIC18.14■□□□□ 0.49
HTRA3P83110 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.14■□□□□ 0.49
HTRA3P83110 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.14■□□□□ 0.49
HTRA3P83110 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HTRA3P83110 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HTRA3P83110 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HTRA3P83110 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
HTRA3P83110 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTRA3P83110 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HTRA3P83110 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HTRA3P83110 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTRA3P83110 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms