Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 AC092850.2-201ENST00000623821 2697 ntBASIC18.35■□□□□ 0.53
CHMP4BP1P59074 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 HLA-V-204ENST00000476601 1289 ntBASIC18.35■□□□□ 0.53
CHMP4BP1P59074 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 AC124947.2-201ENST00000547118 1133 ntBASIC18.35■□□□□ 0.53
CHMP4BP1P59074 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP4BP1P59074 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC007541.1-201ENST00000570282 1469 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AL365203.3-201ENST00000609742 2057 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AL035456.1-201ENST00000456064 1369 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC098859.1-201ENST00000502915 1238 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC105021.1-202ENST00000570572 669 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 AC008738.7-201ENST00000609744 511 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 TEX28P1-201ENST00000613479 1221 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 TEX28P2-201ENST00000617764 1221 ntBASIC18.34■□□□□ 0.53
CHMP4BP1P59074 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP4BP1P59074 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 KRT8P39-201ENST00000396270 1433 ntBASIC18.33■□□□□ 0.53
CHMP4BP1P59074 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 AL391256.1-201ENST00000443260 1855 ntBASIC18.33■□□□□ 0.53
CHMP4BP1P59074 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CHMP4BP1P59074 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP4BP1P59074 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms