Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
WNT3AP56704 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
WNT3AP56704 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.18■□□□□ 0.18
WNT3AP56704 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
WNT3AP56704 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.17■□□□□ 0.18
WNT3AP56704 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.17■□□□□ 0.18
WNT3AP56704 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.17■□□□□ 0.18
WNT3AP56704 MTND6P24-201ENST00000440466 518 ntBASIC16.17■□□□□ 0.18
WNT3AP56704 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.17■□□□□ 0.18
WNT3AP56704 AC069262.1-201ENST00000539058 672 ntBASIC16.17■□□□□ 0.18
WNT3AP56704 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.17■□□□□ 0.18
WNT3AP56704 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
WNT3AP56704 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
WNT3AP56704 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
WNT3AP56704 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.17■□□□□ 0.18
WNT3AP56704 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 AL035456.1-201ENST00000456064 1369 ntBASIC16.16■□□□□ 0.18
WNT3AP56704 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
WNT3AP56704 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.16■□□□□ 0.18
WNT3AP56704 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.16■□□□□ 0.18
WNT3AP56704 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.16■□□□□ 0.18
WNT3AP56704 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
WNT3AP56704 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
WNT3AP56704 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3AP56704 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
WNT3AP56704 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3AP56704 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
WNT3AP56704 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3AP56704 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
WNT3AP56704 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3AP56704 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
WNT3AP56704 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.15■□□□□ 0.18
WNT3AP56704 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3AP56704 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.15■□□□□ 0.18
WNT3AP56704 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms