Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH6P55285 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH6P55285 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDH6P55285 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH6P55285 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CDH6P55285 AP000344.2-201ENST00000512987 629 ntBASIC16.68■□□□□ 0.26
CDH6P55285 RARRES2P9-201ENST00000565168 469 ntBASIC16.68■□□□□ 0.26
CDH6P55285 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 AC055717.3-201ENST00000622967 595 ntBASIC16.68■□□□□ 0.26
CDH6P55285 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.68■□□□□ 0.26
CDH6P55285 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH6P55285 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH6P55285 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH6P55285 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 KRT18P32-201ENST00000424695 1287 ntBASIC16.67■□□□□ 0.26
CDH6P55285 RPS8P6-201ENST00000426177 609 ntBASIC16.67■□□□□ 0.26
CDH6P55285 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH6P55285 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH6P55285 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.67■□□□□ 0.26
CDH6P55285 FLJ16779-201ENST00000612722 7638 ntBASIC16.67■□□□□ 0.26
CDH6P55285 CICP13-201ENST00000422015 2789 ntBASIC16.67■□□□□ 0.26
CDH6P55285 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH6P55285 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDH6P55285 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH6P55285 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH6P55285 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH6P55285 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 AL627223.1-201ENST00000416693 442 ntBASIC16.66■□□□□ 0.26
CDH6P55285 FAM58DP-201ENST00000428076 619 ntBASIC16.66■□□□□ 0.26
CDH6P55285 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 AL139010.1-201ENST00000454878 894 ntBASIC16.66■□□□□ 0.26
CDH6P55285 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH6P55285 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.66■□□□□ 0.26
CDH6P55285 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CDH6P55285 AC093520.2-201ENST00000561830 333 ntBASIC16.66■□□□□ 0.26
CDH6P55285 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH6P55285 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH6P55285 AC023511.2-201ENST00000618803 211 ntBASIC16.66■□□□□ 0.26
CDH6P55285 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms