Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 AC080080.1-201ENST00000625121 2420 ntBASIC11.72□□□□□ -0.53
APOC4P55056 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC4P55056 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
APOC4P55056 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.72□□□□□ -0.53
APOC4P55056 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
APOC4P55056 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 AC007541.1-201ENST00000570282 1469 ntBASIC11.72□□□□□ -0.53
APOC4P55056 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 SPTLC1P1-201ENST00000447199 261 ntBASIC11.72□□□□□ -0.53
APOC4P55056 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC4P55056 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 AL132655.2-201ENST00000596276 594 ntBASIC11.72□□□□□ -0.53
APOC4P55056 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.72□□□□□ -0.53
APOC4P55056 AL109936.8-201ENST00000641772 604 ntBASIC11.72□□□□□ -0.53
APOC4P55056 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 FLJ38576-201ENST00000623820 2459 ntBASIC11.72□□□□□ -0.53
APOC4P55056 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.72□□□□□ -0.53
APOC4P55056 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
APOC4P55056 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.72□□□□□ -0.53
APOC4P55056 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
APOC4P55056 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
APOC4P55056 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
APOC4P55056 MIR661-201ENST00000384842 89 ntBASIC11.71□□□□□ -0.53
APOC4P55056 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 AC015922.1-201ENST00000421102 1152 ntBASIC11.71□□□□□ -0.53
APOC4P55056 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
APOC4P55056 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC4P55056 AC055876.2-201ENST00000531834 546 ntBASIC11.71□□□□□ -0.53
APOC4P55056 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC4P55056 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC4P55056 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.71□□□□□ -0.53
APOC4P55056 AC140912.1-201ENST00000577171 1054 ntBASIC11.71□□□□□ -0.53
APOC4P55056 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.71□□□□□ -0.53
APOC4P55056 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 AC004840.1-201ENST00000636359 365 ntBASIC11.71□□□□□ -0.53
APOC4P55056 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.71□□□□□ -0.53
APOC4P55056 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms