Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLCN4P51793 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
CLCN4P51793 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 MIR1908-201ENST00000410394 80 ntBASIC16.74■□□□□ 0.27
CLCN4P51793 SOCS2P1-201ENST00000417727 557 ntBASIC16.74■□□□□ 0.27
CLCN4P51793 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.74■□□□□ 0.27
CLCN4P51793 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.74■□□□□ 0.27
CLCN4P51793 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN4P51793 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.74■□□□□ 0.27
CLCN4P51793 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 AL606495.2-201ENST00000605867 535 ntBASIC16.74■□□□□ 0.27
CLCN4P51793 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.74■□□□□ 0.27
CLCN4P51793 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLCN4P51793 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCN4P51793 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.74■□□□□ 0.27
CLCN4P51793 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN4P51793 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN4P51793 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 RPL13AP25-201ENST00000484130 612 ntBASIC16.73■□□□□ 0.27
CLCN4P51793 AP001889.1-201ENST00000525414 633 ntBASIC16.73■□□□□ 0.27
CLCN4P51793 AC068587.3-201ENST00000526613 355 ntBASIC16.73■□□□□ 0.27
CLCN4P51793 PTP4A1P2-201ENST00000546033 454 ntBASIC16.73■□□□□ 0.27
CLCN4P51793 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.73■□□□□ 0.27
CLCN4P51793 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.73■□□□□ 0.27
CLCN4P51793 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 REXO1L8P-201ENST00000604378 1897 ntBASIC16.73■□□□□ 0.27
CLCN4P51793 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLCN4P51793 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLCN4P51793 AL118508.1-201ENST00000613502 2345 ntBASIC16.73■□□□□ 0.27
CLCN4P51793 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLCN4P51793 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 PCDHA14-201ENST00000506751 2298 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms