Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF144AP50876 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNF144AP50876 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF144AP50876 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.96□□□□□ -0.02
RNF144AP50876 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RNF144AP50876 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 AC112504.1-201ENST00000623415 1841 ntBASIC14.95□□□□□ -0.02
RNF144AP50876 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF144AP50876 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 GPX1P2-201ENST00000429271 606 ntBASIC14.95□□□□□ -0.02
RNF144AP50876 AL592309.1-201ENST00000443127 649 ntBASIC14.95□□□□□ -0.02
RNF144AP50876 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 AC005829.1-201ENST00000570002 483 ntBASIC14.95□□□□□ -0.02
RNF144AP50876 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
RNF144AP50876 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF144AP50876 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 ELL2P1-201ENST00000413990 1906 ntBASIC14.95□□□□□ -0.02
RNF144AP50876 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF144AP50876 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF144AP50876 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF144AP50876 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNF144AP50876 AC069224.1-201ENST00000566372 1715 ntBASIC14.95□□□□□ -0.02
RNF144AP50876 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.94□□□□□ -0.02
RNF144AP50876 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 RPSAP43-201ENST00000402237 625 ntBASIC14.94□□□□□ -0.02
RNF144AP50876 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.94□□□□□ -0.02
RNF144AP50876 AC069335.1-201ENST00000489972 472 ntBASIC14.94□□□□□ -0.02
RNF144AP50876 IGHV3-62-201ENST00000520057 340 ntBASIC14.94□□□□□ -0.02
RNF144AP50876 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 SLC25A39P2-201ENST00000537614 270 ntBASIC14.94□□□□□ -0.02
RNF144AP50876 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.94□□□□□ -0.02
RNF144AP50876 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 AC134407.2-201ENST00000625089 1978 ntBASIC14.94□□□□□ -0.02
RNF144AP50876 AC144831.1-201ENST00000573312 2656 ntBASIC14.94□□□□□ -0.02
RNF144AP50876 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF144AP50876 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF144AP50876 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RNF144AP50876 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.93□□□□□ -0.02
RNF144AP50876 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms