Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHRNA4P43681 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.15■□□□□ 0.18
CHRNA4P43681 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA4P43681 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 MTND6P24-201ENST00000440466 518 ntBASIC16.15■□□□□ 0.18
CHRNA4P43681 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA4P43681 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.15■□□□□ 0.18
CHRNA4P43681 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.15■□□□□ 0.18
CHRNA4P43681 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHRNA4P43681 AC026979.3-201ENST00000607315 403 ntBASIC16.15■□□□□ 0.18
CHRNA4P43681 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 AL133215.2-201ENST00000609242 977 ntBASIC16.15■□□□□ 0.18
CHRNA4P43681 AC007967.4-201ENST00000614700 386 ntBASIC16.15■□□□□ 0.18
CHRNA4P43681 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 AC079781.4-201ENST00000641908 219 ntBASIC16.15■□□□□ 0.18
CHRNA4P43681 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA4P43681 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA4P43681 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA4P43681 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHRNA4P43681 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA4P43681 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA4P43681 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA4P43681 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA4P43681 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA4P43681 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA4P43681 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA4P43681 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CHRNA4P43681 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.14■□□□□ 0.17
CHRNA4P43681 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CHRNA4P43681 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA4P43681 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.14■□□□□ 0.17
CHRNA4P43681 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA4P43681 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA4P43681 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA4P43681 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.14■□□□□ 0.17
CHRNA4P43681 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA4P43681 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA4P43681 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA4P43681 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CHRNA4P43681 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHRNA4P43681 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CHRNA4P43681 KRT8P37-201ENST00000451609 1420 ntBASIC16.13■□□□□ 0.17
CHRNA4P43681 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRNA4P43681 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRNA4P43681 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA4P43681 AC069262.1-201ENST00000539058 672 ntBASIC16.13■□□□□ 0.17
CHRNA4P43681 AL512356.2-201ENST00000546955 174 ntBASIC16.13■□□□□ 0.17
CHRNA4P43681 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRNA4P43681 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA4P43681 RN7SL828P-201ENST00000607615 303 ntBASIC16.13■□□□□ 0.17
CHRNA4P43681 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRNA4P43681 AC093028.1-201ENST00000622998 982 ntBASIC16.13■□□□□ 0.17
CHRNA4P43681 Z92544.3-201ENST00000624747 417 ntBASIC16.13■□□□□ 0.17
CHRNA4P43681 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms