Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AC105917.1-201ENST00000506637 2539 ntBASIC16.59■□□□□ 0.25
SCNN1AP37088 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCNN1AP37088 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.59■□□□□ 0.25
SCNN1AP37088 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCNN1AP37088 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.59■□□□□ 0.25
SCNN1AP37088 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCNN1AP37088 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCNN1AP37088 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCNN1AP37088 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.58■□□□□ 0.24
SCNN1AP37088 AC009477.1-201ENST00000452936 217 ntBASIC16.58■□□□□ 0.24
SCNN1AP37088 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.58■□□□□ 0.24
SCNN1AP37088 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.58■□□□□ 0.24
SCNN1AP37088 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.58■□□□□ 0.24
SCNN1AP37088 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.58■□□□□ 0.24
SCNN1AP37088 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SCNN1AP37088 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.58■□□□□ 0.24
SCNN1AP37088 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCNN1AP37088 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SCNN1AP37088 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SCNN1AP37088 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.57■□□□□ 0.24
SCNN1AP37088 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 BTBD7P1-201ENST00000447253 1453 ntBASIC16.57■□□□□ 0.24
SCNN1AP37088 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.57■□□□□ 0.24
SCNN1AP37088 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.57■□□□□ 0.24
SCNN1AP37088 RPL13P2-201ENST00000440687 659 ntBASIC16.57■□□□□ 0.24
SCNN1AP37088 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 SLED1-202ENST00000512051 380 ntBASIC16.57■□□□□ 0.24
SCNN1AP37088 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.57■□□□□ 0.24
SCNN1AP37088 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCNN1AP37088 AC093512.1-201ENST00000617969 520 ntBASIC16.57■□□□□ 0.24
SCNN1AP37088 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCNN1AP37088 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.57■□□□□ 0.24
SCNN1AP37088 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCNN1AP37088 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SCNN1AP37088 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
SCNN1AP37088 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SCNN1AP37088 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.56■□□□□ 0.24
SCNN1AP37088 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.56■□□□□ 0.24
SCNN1AP37088 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCNN1AP37088 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms