Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
RFC1P35251 AC055717.3-201ENST00000622967 595 ntBASIC16.92■□□□□ 0.3
RFC1P35251 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.92■□□□□ 0.3
RFC1P35251 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.92■□□□□ 0.3
RFC1P35251 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFC1P35251 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
RFC1P35251 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFC1P35251 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFC1P35251 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFC1P35251 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFC1P35251 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.91■□□□□ 0.3
RFC1P35251 AL136982.4-201ENST00000437689 1740 ntBASIC16.91■□□□□ 0.3
RFC1P35251 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.91■□□□□ 0.3
RFC1P35251 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RFC1P35251 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.91■□□□□ 0.3
RFC1P35251 KRT18P32-201ENST00000424695 1287 ntBASIC16.91■□□□□ 0.3
RFC1P35251 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
RFC1P35251 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.91■□□□□ 0.3
RFC1P35251 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RFC1P35251 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.91■□□□□ 0.3
RFC1P35251 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.91■□□□□ 0.3
RFC1P35251 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFC1P35251 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RFC1P35251 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 AL162727.3-201ENST00000635661 2787 ntBASIC16.91■□□□□ 0.3
RFC1P35251 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFC1P35251 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RFC1P35251 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RFC1P35251 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC1P35251 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RFC1P35251 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC1P35251 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC1P35251 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFC1P35251 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RFC1P35251 GPS2P2-201ENST00000430745 888 ntBASIC16.9■□□□□ 0.3
RFC1P35251 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.9■□□□□ 0.3
RFC1P35251 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.9■□□□□ 0.3
RFC1P35251 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.9■□□□□ 0.3
RFC1P35251 ALG1L8P-201ENST00000533887 760 ntBASIC16.9■□□□□ 0.3
RFC1P35251 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 AC004835.2-201ENST00000603762 682 ntBASIC16.9■□□□□ 0.3
RFC1P35251 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFC1P35251 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.9■□□□□ 0.3
RFC1P35251 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFC1P35251 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFC1P35251 BNIP3P1-202ENST00000550043 1585 ntBASIC16.89■□□□□ 0.3
RFC1P35251 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RFC1P35251 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms