Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 AC112504.1-201ENST00000623415 1841 ntBASIC14.76□□□□□ -0.05
ABCD3P28288 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 MIR770-201ENST00000390219 98 ntBASIC14.76□□□□□ -0.05
ABCD3P28288 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 AC241585.1-201ENST00000433527 519 ntBASIC14.76□□□□□ -0.05
ABCD3P28288 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.76□□□□□ -0.05
ABCD3P28288 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 SERBP1P3-201ENST00000459980 809 ntBASIC14.76□□□□□ -0.05
ABCD3P28288 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 AC093214.1-201ENST00000511688 1107 ntBASIC14.76□□□□□ -0.05
ABCD3P28288 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.76□□□□□ -0.05
ABCD3P28288 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCD3P28288 REXO1L1P-202ENST00000608646 1974 ntBASIC14.76□□□□□ -0.05
ABCD3P28288 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCD3P28288 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCD3P28288 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ABCD3P28288 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCD3P28288 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 FO393414.2-201ENST00000405153 598 ntBASIC14.75□□□□□ -0.05
ABCD3P28288 BASP1P1-201ENST00000430708 665 ntBASIC14.75□□□□□ -0.05
ABCD3P28288 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.75□□□□□ -0.05
ABCD3P28288 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.75□□□□□ -0.05
ABCD3P28288 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 AL355385.1-201ENST00000606123 409 ntBASIC14.75□□□□□ -0.05
ABCD3P28288 AL590560.3-201ENST00000623350 461 ntBASIC14.75□□□□□ -0.05
ABCD3P28288 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ABCD3P28288 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCD3P28288 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ABCD3P28288 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ABCD3P28288 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCD3P28288 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms