Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL1P22362 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCL1P22362 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL1P22362 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.77□□□□□ -0.2
CCL1P22362 TNRC18P2-201ENST00000417666 2714 ntBASIC13.77□□□□□ -0.2
CCL1P22362 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CCL1P22362 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.77□□□□□ -0.2
CCL1P22362 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
CCL1P22362 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL1P22362 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
CCL1P22362 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CCL1P22362 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 AC023274.1-201ENST00000418278 595 ntBASIC13.77□□□□□ -0.21
CCL1P22362 AL645939.2-201ENST00000427340 991 ntBASIC13.77□□□□□ -0.21
CCL1P22362 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 KRT8P44-201ENST00000441609 1350 ntBASIC13.77□□□□□ -0.21
CCL1P22362 MST1L-201ENST00000442552 2185 ntBASIC13.77□□□□□ -0.21
CCL1P22362 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 PHKG1P2-201ENST00000457537 863 ntBASIC13.77□□□□□ -0.21
CCL1P22362 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL1P22362 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL1P22362 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.77□□□□□ -0.21
CCL1P22362 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL1P22362 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.77□□□□□ -0.21
CCL1P22362 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL1P22362 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 DBET-201ENST00000630918 3363 ntBASIC13.77□□□□□ -0.21
CCL1P22362 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL1P22362 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL1P22362 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
CCL1P22362 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 YBX2P1-201ENST00000394192 760 ntBASIC13.76□□□□□ -0.21
CCL1P22362 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 IGHV3-62-201ENST00000520057 340 ntBASIC13.76□□□□□ -0.21
CCL1P22362 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.76□□□□□ -0.21
CCL1P22362 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CCL1P22362 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL1P22362 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL1P22362 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL1P22362 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL1P22362 AC099063.4-201ENST00000641099 1602 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms