Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.63□□□□□ -0.07
CD53P19397 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.63□□□□□ -0.07
CD53P19397 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.63□□□□□ -0.07
CD53P19397 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.63□□□□□ -0.07
CD53P19397 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.63□□□□□ -0.07
CD53P19397 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD53P19397 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.62□□□□□ -0.07
CD53P19397 AC144831.1-201ENST00000573312 2656 ntBASIC14.62□□□□□ -0.07
CD53P19397 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.62□□□□□ -0.07
CD53P19397 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 PMS2P4-201ENST00000412466 1052 ntBASIC14.62□□□□□ -0.07
CD53P19397 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.62□□□□□ -0.07
CD53P19397 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.62□□□□□ -0.07
CD53P19397 AC093214.1-201ENST00000511688 1107 ntBASIC14.62□□□□□ -0.07
CD53P19397 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.62□□□□□ -0.07
CD53P19397 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 DUX4L27-201ENST00000554796 1261 ntBASIC14.62□□□□□ -0.07
CD53P19397 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CD53P19397 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CD53P19397 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CD53P19397 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD53P19397 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.61□□□□□ -0.07
CD53P19397 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD53P19397 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.61□□□□□ -0.07
CD53P19397 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD53P19397 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD53P19397 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 AL355306.1-201ENST00000415580 579 ntBASIC14.61□□□□□ -0.07
CD53P19397 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.61□□□□□ -0.07
CD53P19397 AL671277.1-201ENST00000429656 993 ntBASIC14.61□□□□□ -0.07
CD53P19397 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.61□□□□□ -0.07
CD53P19397 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.61□□□□□ -0.07
CD53P19397 AC005237.2-201ENST00000434368 219 ntBASIC14.61□□□□□ -0.07
CD53P19397 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.61□□□□□ -0.07
CD53P19397 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.61□□□□□ -0.07
CD53P19397 FAM86C2P-203ENST00000528684 1004 ntBASIC14.61□□□□□ -0.07
CD53P19397 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.61□□□□□ -0.07
CD53P19397 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.61□□□□□ -0.07
CD53P19397 AC020765.3-201ENST00000613051 740 ntBASIC14.61□□□□□ -0.07
CD53P19397 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.61□□□□□ -0.07
CD53P19397 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD53P19397 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms