Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.37■□□□□ 0.53
BMP3P12645 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BMP3P12645 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BMP3P12645 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BMP3P12645 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.36■□□□□ 0.53
BMP3P12645 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.36■□□□□ 0.53
BMP3P12645 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.36■□□□□ 0.53
BMP3P12645 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.36■□□□□ 0.53
BMP3P12645 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.36■□□□□ 0.53
BMP3P12645 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.36■□□□□ 0.53
BMP3P12645 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BMP3P12645 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BMP3P12645 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.35■□□□□ 0.53
BMP3P12645 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.35■□□□□ 0.53
BMP3P12645 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.35■□□□□ 0.53
BMP3P12645 FAM86LP-201ENST00000478302 853 ntBASIC18.35■□□□□ 0.53
BMP3P12645 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.35■□□□□ 0.53
BMP3P12645 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.35■□□□□ 0.53
BMP3P12645 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.35■□□□□ 0.53
BMP3P12645 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.35■□□□□ 0.53
BMP3P12645 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
BMP3P12645 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 AL033527.5-201ENST00000641382 801 ntBASIC18.35■□□□□ 0.53
BMP3P12645 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BMP3P12645 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BMP3P12645 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BMP3P12645 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.34■□□□□ 0.53
BMP3P12645 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.34■□□□□ 0.53
BMP3P12645 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.34■□□□□ 0.53
BMP3P12645 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.34■□□□□ 0.53
BMP3P12645 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.34■□□□□ 0.53
BMP3P12645 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BMP3P12645 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms