Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.54□□□□□ -0.4
CD28P10747 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.54□□□□□ -0.4
CD28P10747 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.54□□□□□ -0.4
CD28P10747 MIR4321-201ENST00000592276 80 ntBASIC12.54□□□□□ -0.4
CD28P10747 AL365330.1-201ENST00000607459 531 ntBASIC12.54□□□□□ -0.4
CD28P10747 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.54□□□□□ -0.4
CD28P10747 SLC7A15P-201ENST00000424028 1363 ntBASIC12.54□□□□□ -0.4
CD28P10747 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD28P10747 AL136982.4-201ENST00000437689 1740 ntBASIC12.54□□□□□ -0.4
CD28P10747 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CD28P10747 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD28P10747 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD28P10747 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD28P10747 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CD28P10747 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
CD28P10747 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.53□□□□□ -0.4
CD28P10747 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.53□□□□□ -0.4
CD28P10747 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.53□□□□□ -0.4
CD28P10747 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.53□□□□□ -0.4
CD28P10747 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CD28P10747 AC055876.2-201ENST00000531834 546 ntBASIC12.53□□□□□ -0.4
CD28P10747 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
CD28P10747 AC023310.3-201ENST00000557027 670 ntBASIC12.53□□□□□ -0.4
CD28P10747 AC100756.1-201ENST00000562736 682 ntBASIC12.53□□□□□ -0.4
CD28P10747 AC138749.3-201ENST00000567691 622 ntBASIC12.53□□□□□ -0.4
CD28P10747 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.53□□□□□ -0.4
CD28P10747 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 AC116165.1-201ENST00000611806 668 ntBASIC12.53□□□□□ -0.4
CD28P10747 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CD28P10747 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD28P10747 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.53□□□□□ -0.4
CD28P10747 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.52□□□□□ -0.4
CD28P10747 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.52□□□□□ -0.4
CD28P10747 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CD28P10747 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD28P10747 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms