Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SRPRAP08240 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.11■□□□□ 0.17
SRPRAP08240 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 AL596087.1-201ENST00000400979 1969 ntBASIC16.11■□□□□ 0.17
SRPRAP08240 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRPRAP08240 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SRPRAP08240 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SRPRAP08240 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SRPRAP08240 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
SRPRAP08240 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 KRT17P7-201ENST00000451704 1104 ntBASIC16.1■□□□□ 0.17
SRPRAP08240 AC011495.1-201ENST00000498085 584 ntBASIC16.1■□□□□ 0.17
SRPRAP08240 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 AC104596.2-201ENST00000512793 793 ntBASIC16.1■□□□□ 0.17
SRPRAP08240 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.1■□□□□ 0.17
SRPRAP08240 TMEM261P1-201ENST00000604899 340 ntBASIC16.1■□□□□ 0.17
SRPRAP08240 AL391069.4-201ENST00000609583 481 ntBASIC16.1■□□□□ 0.17
SRPRAP08240 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SRPRAP08240 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.1■□□□□ 0.17
SRPRAP08240 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.1■□□□□ 0.17
SRPRAP08240 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.1■□□□□ 0.17
SRPRAP08240 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.1■□□□□ 0.17
SRPRAP08240 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRPRAP08240 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SRPRAP08240 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SRPRAP08240 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.09■□□□□ 0.17
SRPRAP08240 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.09■□□□□ 0.17
SRPRAP08240 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 SLED1-202ENST00000512051 380 ntBASIC16.09■□□□□ 0.17
SRPRAP08240 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.09■□□□□ 0.17
SRPRAP08240 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 WASH4P-201ENST00000564273 1246 ntBASIC16.09■□□□□ 0.17
SRPRAP08240 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.09■□□□□ 0.17
SRPRAP08240 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.09■□□□□ 0.17
SRPRAP08240 AC097359.3-201ENST00000603982 1210 ntBASIC16.09■□□□□ 0.17
SRPRAP08240 AL158212.4-201ENST00000624062 1286 ntBASIC16.09■□□□□ 0.17
SRPRAP08240 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 PCDHB19P-201ENST00000570871 2371 ntBASIC16.09■□□□□ 0.17
SRPRAP08240 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SRPRAP08240 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRPRAP08240 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.09■□□□□ 0.17
SRPRAP08240 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SRPRAP08240 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SRPRAP08240 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms