Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 KLF2P3-201ENST00000451977 1087 ntBASIC16.22■□□□□ 0.19
HLA-DQB2P05538 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 CICP13-201ENST00000422015 2789 ntBASIC16.22■□□□□ 0.19
HLA-DQB2P05538 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 KRT8P12-202ENST00000472924 1397 ntBASIC16.22■□□□□ 0.19
HLA-DQB2P05538 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB2P05538 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 CETN4P-206ENST00000642099 2168 ntBASIC16.21■□□□□ 0.19
HLA-DQB2P05538 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 PHKG1P2-201ENST00000457537 863 ntBASIC16.21■□□□□ 0.19
HLA-DQB2P05538 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 HNRNPUP1-201ENST00000554987 333 ntBASIC16.21■□□□□ 0.19
HLA-DQB2P05538 MIR4313-201ENST00000580760 101 ntBASIC16.21■□□□□ 0.19
HLA-DQB2P05538 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB2P05538 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
HLA-DQB2P05538 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-DQB2P05538 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.21■□□□□ 0.18
HLA-DQB2P05538 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DQB2P05538 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DQB2P05538 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-DQB2P05538 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 RPL37AP1-201ENST00000412502 279 ntBASIC16.2■□□□□ 0.18
HLA-DQB2P05538 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 FAM86GP-201ENST00000448322 971 ntBASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AL138828.2-201ENST00000615812 383 ntBASIC16.2■□□□□ 0.18
HLA-DQB2P05538 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.2■□□□□ 0.18
HLA-DQB2P05538 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AL139384.1-201ENST00000612143 3047 ntBASIC16.2■□□□□ 0.18
HLA-DQB2P05538 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB2P05538 AC046158.3-201ENST00000624947 2558 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms