Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
POLR3DP05423 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
POLR3DP05423 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR3DP05423 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
POLR3DP05423 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR3DP05423 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR3DP05423 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR3DP05423 AC104794.3-201ENST00000566840 1248 ntBASIC19.13■□□□□ 0.65
POLR3DP05423 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.13■□□□□ 0.65
POLR3DP05423 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.13■□□□□ 0.65
POLR3DP05423 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.13■□□□□ 0.65
POLR3DP05423 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 AL691432.1-201ENST00000596308 1422 ntBASIC19.13■□□□□ 0.65
POLR3DP05423 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR3DP05423 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR3DP05423 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 AL513523.2-202ENST00000427283 2040 ntBASIC19.13■□□□□ 0.65
POLR3DP05423 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.13■□□□□ 0.65
POLR3DP05423 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
POLR3DP05423 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
POLR3DP05423 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.13■□□□□ 0.65
POLR3DP05423 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR3DP05423 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.12■□□□□ 0.65
POLR3DP05423 GNAQP1-201ENST00000444815 1067 ntBASIC19.12■□□□□ 0.65
POLR3DP05423 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR3DP05423 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.12■□□□□ 0.65
POLR3DP05423 SDHAP3-202ENST00000515467 728 ntBASIC19.12■□□□□ 0.65
POLR3DP05423 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.12■□□□□ 0.65
POLR3DP05423 AL662799.1-202ENST00000614205 422 ntBASIC19.12■□□□□ 0.65
POLR3DP05423 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.12■□□□□ 0.65
POLR3DP05423 AL109936.8-201ENST00000641772 604 ntBASIC19.12■□□□□ 0.65
POLR3DP05423 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
POLR3DP05423 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
POLR3DP05423 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.12■□□□□ 0.65
POLR3DP05423 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
POLR3DP05423 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR3DP05423 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
POLR3DP05423 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
POLR3DP05423 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
POLR3DP05423 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
POLR3DP05423 AC007541.1-201ENST00000570282 1469 ntBASIC19.11■□□□□ 0.65
POLR3DP05423 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR3DP05423 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
POLR3DP05423 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
POLR3DP05423 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
POLR3DP05423 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR3DP05423 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR3DP05423 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
POLR3DP05423 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR3DP05423 AC245100.5-201ENST00000452108 331 ntBASIC19.11■□□□□ 0.65
POLR3DP05423 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.11■□□□□ 0.65
POLR3DP05423 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR3DP05423 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
POLR3DP05423 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms