Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TCRAP04437 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TCRAP04437 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRAP04437 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRAP04437 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TCRAP04437 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRAP04437 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRAP04437 SBF1P1-201ENST00000444527 5631 ntBASIC12.24□□□□□ -0.45
TCRAP04437 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.24□□□□□ -0.45
TCRAP04437 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 AP001282.1-201ENST00000531301 1499 ntBASIC12.24□□□□□ -0.45
TCRAP04437 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.24□□□□□ -0.45
TCRAP04437 AC087388.1-201ENST00000571370 1112 ntBASIC12.24□□□□□ -0.45
TCRAP04437 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 AC025062.2-201ENST00000605477 670 ntBASIC12.24□□□□□ -0.45
TCRAP04437 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.24□□□□□ -0.45
TCRAP04437 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRAP04437 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.24□□□□□ -0.45
TCRAP04437 CICP23-201ENST00000605013 2741 ntBASIC12.24□□□□□ -0.45
TCRAP04437 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
TCRAP04437 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRAP04437 AC091951.1-201ENST00000512854 2465 ntBASIC12.23□□□□□ -0.45
TCRAP04437 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRAP04437 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TCRAP04437 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TCRAP04437 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
TCRAP04437 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.23□□□□□ -0.45
TCRAP04437 PMS2P4-201ENST00000412466 1052 ntBASIC12.23□□□□□ -0.45
TCRAP04437 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 DUSP5P1-201ENST00000441325 1139 ntBASIC12.23□□□□□ -0.45
TCRAP04437 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TCRAP04437 AP002469.2-201ENST00000531724 424 ntBASIC12.23□□□□□ -0.45
TCRAP04437 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.23□□□□□ -0.45
TCRAP04437 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TCRAP04437 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.23□□□□□ -0.45
TCRAP04437 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms