Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PDGFAP04085 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.05■□□□□ -0
PDGFAP04085 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.05■□□□□ -0
PDGFAP04085 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.05■□□□□ -0
PDGFAP04085 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.05■□□□□ -0
PDGFAP04085 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.05■□□□□ -0
PDGFAP04085 DBET-201ENST00000630918 3363 ntBASIC15.05■□□□□ -0
PDGFAP04085 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.05■□□□□ -0
PDGFAP04085 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFAP04085 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PDGFAP04085 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PDGFAP04085 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PDGFAP04085 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.04■□□□□ -0
PDGFAP04085 STK33P1-201ENST00000423835 1218 ntBASIC15.04■□□□□ -0
PDGFAP04085 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.04■□□□□ -0
PDGFAP04085 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.04■□□□□ -0
PDGFAP04085 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.04■□□□□ -0
PDGFAP04085 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.04■□□□□ -0
PDGFAP04085 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.04■□□□□ -0
PDGFAP04085 AC007431.3-201ENST00000623221 587 ntBASIC15.04■□□□□ -0
PDGFAP04085 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.04■□□□□ -0
PDGFAP04085 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.04■□□□□ -0
PDGFAP04085 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.04■□□□□ -0
PDGFAP04085 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFAP04085 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.04■□□□□ -0
PDGFAP04085 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 PKD1P5-201ENST00000532415 10291 ntBASIC15.03■□□□□ -0
PDGFAP04085 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDGFAP04085 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDGFAP04085 AL391825.1-201ENST00000457671 1364 ntBASIC15.03■□□□□ -0
PDGFAP04085 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.03■□□□□ -0
PDGFAP04085 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.03■□□□□ -0
PDGFAP04085 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.03■□□□□ -0
PDGFAP04085 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.03■□□□□ -0
PDGFAP04085 AC087499.6-201ENST00000411576 835 ntBASIC15.03■□□□□ -0
PDGFAP04085 RPS2P32-201ENST00000439199 892 ntBASIC15.03■□□□□ -0
PDGFAP04085 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.03■□□□□ -0
PDGFAP04085 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.03■□□□□ -0
PDGFAP04085 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PDGFAP04085 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PDGFAP04085 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PDGFAP04085 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 SNX33P1-201ENST00000592116 1762 ntBASIC15.03■□□□□ -0
PDGFAP04085 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.03■□□□□ -0
PDGFAP04085 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDGFAP04085 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.03■□□□□ -0
PDGFAP04085 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms