Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 PCGF3-213ENST00000620529 1899 ntBASIC14.36□□□□□ -0.11
APOA1P02647 AC107918.4-201ENST00000641966 3141 ntBASIC14.36□□□□□ -0.11
APOA1P02647 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 MMP23A-201ENST00000234610 1017 ntBASIC14.36□□□□□ -0.11
APOA1P02647 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 HBZP1-201ENST00000354915 429 ntBASIC14.36□□□□□ -0.11
APOA1P02647 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.36□□□□□ -0.11
APOA1P02647 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 SIGLEC30P-201ENST00000455569 941 ntBASIC14.36□□□□□ -0.11
APOA1P02647 RNF126P1-202ENST00000569893 925 ntBASIC14.36□□□□□ -0.11
APOA1P02647 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.36□□□□□ -0.11
APOA1P02647 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 AC092919.2-201ENST00000623631 1645 ntBASIC14.36□□□□□ -0.11
APOA1P02647 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.36□□□□□ -0.11
APOA1P02647 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.36□□□□□ -0.11
APOA1P02647 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOA1P02647 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOA1P02647 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 KRT8P39-201ENST00000396270 1433 ntBASIC14.35□□□□□ -0.11
APOA1P02647 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA1P02647 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 RN7SL606P-201ENST00000472779 293 ntBASIC14.35□□□□□ -0.11
APOA1P02647 COX11P1-201ENST00000489116 835 ntBASIC14.35□□□□□ -0.11
APOA1P02647 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.35□□□□□ -0.11
APOA1P02647 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA1P02647 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 BEND3P1-201ENST00000421591 1944 ntBASIC14.35□□□□□ -0.11
APOA1P02647 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA1P02647 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms