Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE6O95741 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE6O95741 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE6O95741 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 AL512652.2-201ENST00000625156 1716 ntBASIC15.76■□□□□ 0.11
CPNE6O95741 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE6O95741 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CPNE6O95741 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE6O95741 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE6O95741 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE6O95741 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CPNE6O95741 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE6O95741 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CPNE6O95741 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CPNE6O95741 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE6O95741 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE6O95741 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.75■□□□□ 0.11
CPNE6O95741 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 SPTLC1P1-201ENST00000447199 261 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 GAPDHP21-201ENST00000450301 1010 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.75■□□□□ 0.11
CPNE6O95741 BANF1P1-201ENST00000553684 263 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 AL079307.3-201ENST00000556114 283 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 SPDYE22P-201ENST00000582158 798 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 AL133215.2-201ENST00000609242 977 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 AL662799.1-202ENST00000614205 422 ntBASIC15.75■□□□□ 0.11
CPNE6O95741 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE6O95741 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE6O95741 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE6O95741 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE6O95741 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE6O95741 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CPNE6O95741 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE6O95741 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CPNE6O95741 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE6O95741 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.74■□□□□ 0.11
CPNE6O95741 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE6O95741 AL844908.2-201ENST00000609461 460 ntBASIC15.74■□□□□ 0.11
CPNE6O95741 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.74■□□□□ 0.11
CPNE6O95741 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE6O95741 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE6O95741 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 GPAA1P2-202ENST00000606848 1787 ntBASIC15.74■□□□□ 0.11
CPNE6O95741 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CPNE6O95741 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE6O95741 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CPNE6O95741 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms