Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN11O75508 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 TARDBPP1-201ENST00000442013 1203 ntBASIC16.31■□□□□ 0.2
CLDN11O75508 SPTLC1P1-201ENST00000447199 261 ntBASIC16.31■□□□□ 0.2
CLDN11O75508 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN11O75508 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 HNRNPUP1-201ENST00000554987 333 ntBASIC16.31■□□□□ 0.2
CLDN11O75508 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN11O75508 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN11O75508 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 AL391005.1-201ENST00000623953 2435 ntBASIC16.31■□□□□ 0.2
CLDN11O75508 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN11O75508 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN11O75508 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN11O75508 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN11O75508 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN11O75508 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLDN11O75508 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN11O75508 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.3■□□□□ 0.2
CLDN11O75508 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 TIMM17BP1-201ENST00000545713 516 ntBASIC16.3■□□□□ 0.2
CLDN11O75508 AC104794.3-201ENST00000566840 1248 ntBASIC16.3■□□□□ 0.2
CLDN11O75508 AC092337.1-201ENST00000568699 1129 ntBASIC16.3■□□□□ 0.2
CLDN11O75508 SRD5A3P1-201ENST00000603021 949 ntBASIC16.3■□□□□ 0.2
CLDN11O75508 AC097359.3-201ENST00000603982 1210 ntBASIC16.3■□□□□ 0.2
CLDN11O75508 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN11O75508 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN11O75508 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN11O75508 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN11O75508 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 AC026691.1-201ENST00000602502 2017 ntBASIC16.29■□□□□ 0.2
CLDN11O75508 AC018892.3-201ENST00000623986 2499 ntBASIC16.29■□□□□ 0.2
CLDN11O75508 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN11O75508 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN11O75508 DOC2GP-202ENST00000514950 1163 ntBASIC16.29■□□□□ 0.2
CLDN11O75508 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN11O75508 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms