Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.22■□□□□ 0.03
SCN2BO60939 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SCN2BO60939 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.22■□□□□ 0.03
SCN2BO60939 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.22■□□□□ 0.03
SCN2BO60939 AC098859.1-201ENST00000502915 1238 ntBASIC15.22■□□□□ 0.03
SCN2BO60939 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SCN2BO60939 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.22■□□□□ 0.03
SCN2BO60939 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.22■□□□□ 0.03
SCN2BO60939 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SCN2BO60939 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.22■□□□□ 0.03
SCN2BO60939 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCN2BO60939 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 AC090616.6-203ENST00000579186 1945 ntBASIC15.21■□□□□ 0.03
SCN2BO60939 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 AC006486.2-201ENST00000624246 2199 ntBASIC15.21■□□□□ 0.03
SCN2BO60939 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.21■□□□□ 0.03
SCN2BO60939 FDX1P1-201ENST00000449115 551 ntBASIC15.21■□□□□ 0.03
SCN2BO60939 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.21■□□□□ 0.03
SCN2BO60939 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
SCN2BO60939 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.21■□□□□ 0.03
SCN2BO60939 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.21■□□□□ 0.03
SCN2BO60939 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCN2BO60939 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.21■□□□□ 0.03
SCN2BO60939 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SCN2BO60939 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCN2BO60939 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SCN2BO60939 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.21■□□□□ 0.02
SCN2BO60939 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCN2BO60939 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SCN2BO60939 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SCN2BO60939 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCN2BO60939 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SCN2BO60939 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
SCN2BO60939 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.2■□□□□ 0.02
SCN2BO60939 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.2■□□□□ 0.02
SCN2BO60939 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.2■□□□□ 0.02
SCN2BO60939 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 AC023157.3-201ENST00000619086 2088 ntBASIC15.2■□□□□ 0.02
SCN2BO60939 AL691432.1-201ENST00000596308 1422 ntBASIC15.2■□□□□ 0.02
SCN2BO60939 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SCN2BO60939 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCN2BO60939 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms